3 Free Applications for STEM Majors (That You’ll Actually Use)

As STEM majors, if you look up helpful apps to help you while studying or writing papers, you’ll get a lot of listicles of apps that fall under a few categories:

  1. Costs money (or hidden costs)
  2. Does the same thing as a bunch of other apps. Most everyone already has a note-taking method, to do manager, or calendar that they already are comfortable using. Why use a new one?
  3. Way too technical and hard to understand

Instead, I’ve compiled 3 apps that add value to your life in the following ways:

  1. Free
  2. Works as well/better than paid alternatives
  3. Takes less than 15 minutes to set up

Let’s get it started!

Anki

How to learn anatomy with Anki: Flashcards, review | Kenhub
An example of an Anki flashcard from kenhub.com

I was team Quizlet since middle school, but the increased monetization has really driven me off the platform. This past year, I started using Anki, a free app that’s not only a good replacement, but an improvement.

This app isn’t pretty–but if you look past its boring UI, you’ll find a gem of a tool. Here’s the highlights:

  • Basic UI + open-source software means it’s very customizable. With a few enabled settings, you can use it to study almost any kind of content: learning languages, doing physics practice problems, anatomy flashcards, and more. There are different mods you can add to your software to make it work better for you.
  • You can spread out studying over a longer period of time, so you retain info better!
    • Unlike Quizlet, Anki lets you set deadlines for cards depending on how well you know the content.
    • Naturally, you’ll end up studying the stuff you don’t know for much longer, saving you time!
  • So many stats: the app tells you which cards you’re better at, tracks the time you spend studying, and even notes which time of day you answer most accurately.

Zotero

Screenshot of the Zotero desktop application
An example of a Zotero library from zotero.org

No more keeping urls to your research sources in some random Word doc! Writing term papers and research essays has been one of my hardest struggles in college. It can be overwhelming to have to consume a bunch of research and analyze it in a meaningful way. Make it easier for yourself with Zotero, a “personal research assistant” that organizes sources for you. This tool is used by lots of people in academia, but not many undergrads know about it. Here’s what makes it great:

  • It’s easy to add sources! You can use the browser extension to add an entire source with just a click.
  • Once the source is added, all the information is downloaded: bibliographic information, tags associated with the work, a snapshot/pdf of the work
  • If there’s a pdf of the work, it’s saved locally to Zotero and you can take notes/highlight in the in-app pdf viewer!
  • Integrates with Google Docs and Word, where you can quickly add in text citations or a bibliography at the end of your writing

ResearchRabbit

A connection map that ResearchRabbit generated for one of my term papers.

What does it mean to do a “thorough review of the literature”? That phrase can be daunting for undergrads. I don’t know about y’all, but when I’m usually starting a term paper, I don’t even know what I don’t know. Are these papers I’m using representative of the current research? This tool (researchrabbit.ai) gives you suggested papers, and it lets you see how popular your sources are in the field. Here’s my favorite features:

  • The coolest UI that makes it so easy to use
  • Visual maps help you “see” the impact of the sources you’re citing
  • The option to look at “similar work” and “related work” helps you find other sources, especially if you want to look at the current state of the literature

 

These tools have been really helpful for me this year, and I hope they can help y’all too! Give these a go to help you work smarter, not harder. Good luck!

Your journey starts here! Let’s talk!

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  Timothy Durham was convicted of rape when a test showed his DNA genotype matched the DNA recovered from the crime scene. Eye witnesses testified that Durham was in a different state at the time of the incident, but he wasn’t exonerated from his 3000 year sentence until follow up DNA analysis showed that the preliminary forensic analysis used in the trial was misinterpreted (Thomas et al.). DNA testing serves an invaluable part in our criminal justice system, but it comes with complications and bias that can lead to wrongful convictions and misinformed juries.  

Background:

Forensic genetics aims to identify the origin of a biological sample. It can be traced back to Karl Landsteiner who discovered human ABO blood groups. With blood groups, suspects could be eliminated based on their blood type. For example, if a suspect had type A blood and there was type B blood left at the scene by the perpetrator, the investigators could rule out the suspect. Unfortunately, the reverse didn’t work. If the suspect and perpetrator both had the same blood type, it can’t be concluded that the suspect was guilty. Blood identifiers evolved into 8 distinct categories which improved the ability to eliminate suspects, but could only conclude that (if the system matched) it might be the perpetrator or this person might be related to the perpetrator (Jobling and Gill). The field evolved in the 1980s with the discovery of Minisatellites, lines of repetitive DNA that don’t encode proteins. Minisatellite patterns in DNA create what we know today as the DNA fingerprint, and it has a much higher accuracy rate than previous methods (Augustyn et al.). Around the same time, a breakthrough for victims of sexual assault was discovered. In the case of assault, bodily fluids of both the victim and the assaulter can get mixed. A process called differential lysis was created which could selectively increase the concentration of sperm in a fluid sample thereby allowing for accurate DNA testing (Jobling and Gill). Forensics evolved to use single-locus probe testing after several years because of its ease of interpretation. It looked at specific minisatellites that had high variability between subjects. This was the first DNA-based method to be used in a criminal investigation. Two murder homicides from several years apart were connected using DNA evidence. The evidence was then used to exonerate an innocent man, and the guilty party was found when he tried to evade mandatory DNA testing for all men in the small town. His guilt was then reinforced when the DNA profiles matched, and he gave a confession (Jobling and Gill). Finding DNA at a crime scene doesn’t guarantee that you’ll find a murderer. There are issues with non-pure samples and limited samples that make DNA work difficult, and accreditation of facilities and new techniques and take time (Jobling and Gill).  

Subjectivity of DNA Interpretation:

In a 2009 publication, the National Academy of Science discusses the possibility for subjective influence in lab based forensics. The interpretation bias happens in complex cases where, for example, there could be a mixture of DNA. A study published in 2011 looked specifically at this issue. A gang rape happened in Georgia, and the mixture in DNA from the case was used to prosecute one suspect after another suspect took a plea bargain to testify against him. With DNA mixtures, there are three possible conclusions: suspect excluded, suspect cannot be excluded, and inconclusive. If the suspect is excluded, it means that there’s little to no possibility that his DNA is part of the sample. If the suspect cannot be excluded, it means that there’s a possibility that his DNA is part of the sample. In the trial, the DNA examiners who knew the context of the case concluded that the suspect being prosecuted could not be excluded. The 2011 study gave the DNA evidence from this case and the DNA profiles of the suspects to 17 forensic examiners. These examiners had no context of the case, and they all worked independently. Of the 17, only 1 came to the same conclusion (suspect cannot be excluded) as the examiners who knew the context of the case. Twelve of the 17 concluded that the suspect who was prosecuted and convicted had no relation to the DNA found in the sample. Not only does this show that subjectivity occurs due to the context of the case, but the 17 examiners came up with different findings based on their past experiences meaning that not all DNA analysis is objective. Some organizations like the Scientific Working Group on DNA Analysis Methods say that quantitative statistical evidence should be presented with every categorical conclusion, but the US doesn’t require this (Dror and Hampikian).

False Positives:

There are two categories that cause wrongful identification in a DNA report: coincidental matches and false positives. Coincidental matches are DNA matches between two unrelated people. The probability of these matches is about 1 to 500,000 for white individuals and about 1 to 350,000 for black individuals. This small probability of coincidental matches makes people feel confident in DNA evidence. False positives, on the other hand, are matches between DNA and test DNA that result from issues in the forensics lab. There have been multiple cases of forensics labs accidentally switching victim and suspected rapist DNA which lead to convictions that were later overturned when the lab realized the error. There are also cases of misreading or misunderstanding a sample. In a case from 1993, a man was convicted of rape because someone interpreted a mixed sample of victim and perpetrator DNA as an individual sample. The conviction was again overturned. To prevent false convictions, retesting DNA is allowed, but it’s not an efficient solution. Many people are pushing for statistical information on the probability of false positives, so that the jurors can make accurate judgements based on DNA evidence (Thomas et al.).  

Conclusion:

DNA analysis is a useful tool for the criminal justice system, but subjectivity can be an issue in forensic testing. To combat wrongful convictions, there are organizations like The Innocence Project who use DNA testing to free the innocent, but reformed forensic testing standards should be put in place to prevent subjectivity and to ensure juries are correctly informed during trials. https://www.innocenceproject.org/    

Citation:

Augustyn , Adam, et al. “DNA Finerprinting.” Encyclopedia Britannica , 26 Apr. 2018, www.britannica.com/science/DNA-fingerprinting#ref153186. Dror, Itiel E., and Greg Hampikian. “Subjectivity and Bias in Forensic DNA Mixture Interpretation.” Science & Justice, vol. 51, no. 4, 2011, pp. 204–208., doi:10.1016/j.scijus.2011.08.004. Jobling, Mark A., and Peter Gill. “Encoded Evidence: DNA in Forensic Analysis.” Nature Reviews: Genetics, vol. 5, no. 10, Oct. 2004, pp. 739–751., doi:10.1038/nrg1455. Thompson, William C, et al. “How the Probability of a False Positive Affects the Value of DNA Evidence.” Journal of Forensic Sciences, vol. 48, no. 1, Jan. 2003, pp. 1–8., doi:10.1520/jfs2001171.